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\title{Implementing Friendly Bioinformatics on Distributed Systems}
\author{Rory Carmichael}
\work{Thesis}
\degaward{Master of Science\\in\\Computer Science and Engineering}
%\degprior{B. S.}
\advisor{Scott Emrich}
\department{Computer Science and Engineering}
\degdate{December 2012}

\maketitle
%\makecopyright

\begin{abstract}
Stuff about bioinformatics problems being important, large, amenable to parallelization, and of interest primarily to non-CS experts. 
Making resources accessible and usable, tools that are distributable, and inventing novel, scale-leveraging bioinformatics algorithms are important services to that community.

\end{abstract}

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\mainmatter

\include{intro}
\include{biocompute}
\include{pipelines}
\include{rarecodon}
\include{conclusion}

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